Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | BACCOPRO_00360 | Not Available | Negative | 366501 - 367544 | 39951.7 |
| Trna-leu | Not Available | Not Available | Positive | 367729 - 367815 | Not Available |
| hypothetical protein | BACCOPRO_00362 | Not Available | Negative | 367961 - 368200 | 9001.85 |
| hypothetical protein | BACCOPRO_00363 | Not Available | Negative | 368456 - 368698 | 9377.26 |
| hypothetical protein | BACCOPRO_00364 | Not Available | Positive | 368887 - 369876 | 38739.0 |
| hypothetical protein | BACCOPRO_00365 | Not Available | Negative | 369863 - 370915 | 40001.8 |
| hypothetical protein | BACCOPRO_00366 | Not Available | Positive | 370992 - 371183 | 7239.01 |
| Trna-gly | Not Available | Not Available | Positive | 371294 - 371366 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 371375 - 371457 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 371492 - 371564 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


