Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine proteinase inhibitor | BACCOPRO_03680 | Not Available | Positive | 3640162 - 3641451 | 47412.9 |
| hypothetical protein | BACCOPRO_03681 | Not Available | Positive | 3641589 - 3641840 | 9490.3 |
| hypothetical protein | BACCOPRO_03682 | Not Available | Negative | 3641939 - 3642865 | 35471.0 |
| putative esterase | BACCOPRO_03683 | Not Available | Negative | 3642953 - 3643786 | 31293.6 |
| transporter, major facilitator family protein | BACCOPRO_03684 | Not Available | Positive | 3643910 - 3645085 | 42100.0 |
| hypothetical protein | BACCOPRO_03685 | Not Available | Positive | 3645135 - 3646298 | 44654.9 |
| beta galactosidase small chain | BACCOPRO_03686 | Not Available | Positive | 3646385 - 3649978 | 135320.0 |
| hypothetical protein | BACCOPRO_03687 | Not Available | Negative | 3650036 - 3650224 | 7402.66 |
| glycerophosphodiester phosphodiesterase family protein | BACCOPRO_03688 | Not Available | Positive | 3650312 - 3651085 | 28663.8 |
| hypothetical protein | BACCOPRO_03689 | Not Available | Positive | 3651089 - 3652549 | 54970.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


