Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein fad-binding domain protein | BACCOPRO_03530 | Not Available | Positive | 3483842 - 3484861 | 37016.7 |
| acyl-coa dehydrogenase, c-terminal domain protein | BACCOPRO_03531 | Not Available | Positive | 3484861 - 3486570 | 63964.9 |
| hypothetical protein | BACCOPRO_03532 | Not Available | Positive | 3486577 - 3486726 | 5581.02 |
| hypothetical protein | BACCOPRO_03533 | Not Available | Positive | 3486778 - 3486963 | 7105.06 |
| hypothetical protein | BACCOPRO_03534 | Not Available | Negative | 3487085 - 3487462 | 14769.5 |
| sigma-70 region 2 | BACCOPRO_03535 | Not Available | Negative | 3487459 - 3488013 | 21755.8 |
| hypothetical protein | BACCOPRO_03536 | Not Available | Positive | 3488214 - 3488627 | 15367.2 |
| glucose/galactose transporter warning | BACCOPRO_03537 | Not Available | Negative | 3488737 - 3489948 | 43512.4 |
| hypothetical protein | BACCOPRO_03538 | Not Available | Positive | 3489990 - 3490190 | 7991.92 |
| putative potassium/proton antiporter | BACCOPRO_03539 | Not Available | Negative | 3490277 - 3491737 | 53354.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


