Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03470 | Not Available | Positive | 3428065 - 3428805 | 28692.5 |
| hypothetical protein | BACCOPRO_03471 | Not Available | Positive | 3428812 - 3429393 | 22037.3 |
| dhh family protein | BACCOPRO_03472 | Not Available | Positive | 3429664 - 3430701 | 38983.0 |
| hypothetical protein | BACCOPRO_03473 | Not Available | Positive | 3430783 - 3431445 | 25088.5 |
| phosphoglucosamine mutase | BACCOPRO_03474 | Not Available | Positive | 3431457 - 3432845 | 50399.4 |
| hypothetical protein | BACCOPRO_03475 | Not Available | Negative | 3432960 - 3433361 | 15018.4 |
| hypothetical protein | BACCOPRO_03476 | Not Available | Negative | 3433469 - 3434476 | 39387.0 |
| hypothetical protein | BACCOPRO_03477 | Not Available | Positive | 3434676 - 3434912 | 8826.72 |
| hypothetical protein | BACCOPRO_03478 | Not Available | Positive | 3435099 - 3435371 | 9523.56 |
| hypothetical protein | BACCOPRO_03479 | Not Available | Positive | 3435447 - 3436490 | 39756.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


