Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03449 | Not Available | Positive | 3408353 - 3408919 | 21405.5 |
| hypothetical protein | BACCOPRO_03451 | Not Available | Positive | 3408921 - 3409424 | 18882.8 |
| hypothetical protein | BACCOPRO_03452 | Not Available | Positive | 3409537 - 3409713 | 6585.39 |
| hypothetical protein | BACCOPRO_03453 | Not Available | Negative | 3409766 - 3410281 | 18639.5 |
| hypothetical protein | BACCOPRO_03454 | Not Available | Negative | 3410431 - 3410631 | 7677.28 |
| hypothetical protein | BACCOPRO_03455 | Not Available | Positive | 3410820 - 3411041 | 8212.89 |
| hypothetical protein | BACCOPRO_03456 | Not Available | Positive | 3411054 - 3411626 | 22089.7 |
| hypothetical protein | BACCOPRO_03457 | Not Available | Negative | 3411766 - 3412119 | 13166.5 |
| hypothetical protein | BACCOPRO_03458 | Not Available | Negative | 3412139 - 3412624 | 18467.3 |
| hypothetical protein | BACCOPRO_03459 | Not Available | Negative | 3412630 - 3413187 | 21054.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


