Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muts domain i protein | BACCOPRO_03430 | Not Available | Negative | 3393553 - 3395802 | 86310.2 |
| hypothetical protein | BACCOPRO_03431 | Not Available | Negative | 3395822 - 3397606 | 66272.3 |
| hypothetical protein | BACCOPRO_03432 | Not Available | Negative | 3397621 - 3397827 | 8469.97 |
| peptidase, m23 family | BACCOPRO_03433 | Not Available | Negative | 3397926 - 3398756 | 31009.2 |
| hypothetical protein | BACCOPRO_03434 | Not Available | Negative | 3398783 - 3399427 | 21915.4 |
| hypothetical protein | BACCOPRO_03435 | Not Available | Negative | 3399440 - 3400126 | 26459.2 |
| hypothetical protein | BACCOPRO_03436 | Not Available | Negative | 3400139 - 3400834 | 25635.7 |
| hypothetical protein | BACCOPRO_03437 | Not Available | Negative | 3400815 - 3401300 | 18877.5 |
| hypothetical protein | BACCOPRO_03438 | Not Available | Negative | 3401313 - 3403004 | 64633.8 |
| hypothetical protein | BACCOPRO_03439 | Not Available | Negative | 3403009 - 3404544 | 58010.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


