Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03410 | Not Available | Negative | 3377580 - 3377714 | 4858.0 |
| resolvase, n-terminal domain protein | BACCOPRO_03411 | Not Available | Negative | 3377966 - 3378724 | 29202.3 |
| hypothetical protein | BACCOPRO_03412 | Not Available | Positive | 3378968 - 3379897 | 36135.4 |
| hypothetical protein | BACCOPRO_03413 | Not Available | Positive | 3379905 - 3380357 | 17479.0 |
| hypothetical protein | BACCOPRO_03414 | Not Available | Positive | 3380392 - 3380763 | 14711.9 |
| hypothetical protein | BACCOPRO_03415 | Not Available | Positive | 3380760 - 3381317 | 21175.1 |
| hypothetical protein | BACCOPRO_03416 | Not Available | Positive | 3381342 - 3382202 | 31749.5 |
| putative plasmid recombination enzyme | BACCOPRO_03417 | Not Available | Positive | 3382340 - 3383866 | 58144.2 |
| ompa family protein | BACCOPRO_03418 | Not Available | Positive | 3383920 - 3385362 | 53827.0 |
| hypothetical protein | BACCOPRO_03419 | Not Available | Negative | 3385398 - 3385613 | 8308.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


