Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03400 | Not Available | Positive | 3373994 - 3374251 | 10303.4 |
| hypothetical protein | BACCOPRO_03401 | Not Available | Negative | 3374232 - 3374366 | 4895.15 |
| hypothetical protein | BACCOPRO_03403 | Not Available | Negative | 3374367 - 3374675 | 11011.1 |
| hypothetical protein | BACCOPRO_03402 | Not Available | Positive | 3374663 - 3374836 | 6789.23 |
| single-strand binding family protein | BACCOPRO_03404 | Not Available | Positive | 3374933 - 3375316 | 14472.3 |
| hypothetical protein | BACCOPRO_03405 | Not Available | Positive | 3375531 - 3375728 | 7899.58 |
| hypothetical protein | BACCOPRO_03406 | Not Available | Positive | 3375733 - 3376047 | 12533.8 |
| hypothetical protein | BACCOPRO_03407 | Not Available | Positive | 3376103 - 3376603 | 19169.8 |
| hypothetical protein | BACCOPRO_03408 | Not Available | Positive | 3376594 - 3376947 | 13826.8 |
| hypothetical protein | BACCOPRO_03409 | Not Available | Positive | 3377078 - 3377332 | 10284.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


