Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein dnaj | BACCOPRO_03390 | Not Available | Negative | 3366940 - 3368103 | 41725.9 |
| co-chaperone grpe | BACCOPRO_03391 | Not Available | Negative | 3368111 - 3368692 | 21682.6 |
| abc transporter, atp-binding protein | BACCOPRO_03392 | Not Available | Positive | 3368962 - 3370581 | 61007.8 |
| hypothetical protein | BACCOPRO_03393 | Not Available | Positive | 3370667 - 3371824 | 44225.7 |
| hypothetical protein | BACCOPRO_03394 | Not Available | Positive | 3372005 - 3372133 | 5112.7 |
| hypothetical protein | BACCOPRO_03395 | Not Available | Positive | 3372416 - 3372664 | 9378.79 |
| hypothetical protein | BACCOPRO_03396 | Not Available | Negative | 3372759 - 3373085 | 12752.3 |
| hypothetical protein | BACCOPRO_03397 | Not Available | Positive | 3373108 - 3373446 | 13567.0 |
| hypothetical protein | BACCOPRO_03398 | Not Available | Positive | 3373465 - 3373638 | 6482.57 |
| hypothetical protein | BACCOPRO_03399 | Not Available | Positive | 3373653 - 3373982 | 12851.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


