Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l22 | BACCOPRO_00330 | Not Available | Positive | 347109 - 347516 | 15425.9 |
| ribosomal protein s3 | BACCOPRO_00331 | Not Available | Positive | 347523 - 348257 | 27245.3 |
| ribosomal protein l16 | BACCOPRO_00332 | Not Available | Positive | 348279 - 348710 | 16044.7 |
| ribosomal protein l29 | BACCOPRO_00333 | Not Available | Positive | 348717 - 348911 | 7416.09 |
| 30s ribosomal protein s17 | BACCOPRO_00334 | Not Available | Positive | 348914 - 349180 | 10385.9 |
| ribosomal protein l14 | BACCOPRO_00335 | Not Available | Positive | 349183 - 349548 | 13087.1 |
| ribosomal protein l24 | BACCOPRO_00336 | Not Available | Positive | 349569 - 349889 | 11527.0 |
| ribosomal protein l5 | BACCOPRO_00337 | Not Available | Positive | 349889 - 350449 | 20994.0 |
| ribosomal protein s14p/s29e | BACCOPRO_00338 | Not Available | Positive | 350456 - 350755 | 11119.8 |
| ribosomal protein s8 | BACCOPRO_00339 | Not Available | Positive | 350811 - 351206 | 14510.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


