Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arc-like dna-binding protein | BACCOPRO_03330 | Not Available | Positive | 3295048 - 3295248 | 7490.01 |
| hypothetical protein | BACCOPRO_03331 | Not Available | Positive | 3295241 - 3295813 | 21561.2 |
| alpha-l-fucosidase | BACCOPRO_03332 | Not Available | Negative | 3295919 - 3298009 | 78765.2 |
| hypothetical protein | BACCOPRO_03333 | Not Available | Positive | 3298173 - 3298431 | 9811.35 |
| hypothetical protein | BACCOPRO_03334 | Not Available | Positive | 3298434 - 3298646 | 8375.47 |
| hypothetical protein | BACCOPRO_03336 | Not Available | Negative | 3298613 - 3298768 | 6132.65 |
| hypothetical protein | BACCOPRO_03335 | Not Available | Positive | 3298753 - 3299454 | 27408.1 |
| putative permease | BACCOPRO_03337 | Not Available | Positive | 3299469 - 3300755 | 45682.6 |
| arylsulfatase | BACCOPRO_03338 | Not Available | Positive | 3300985 - 3302565 | 58203.7 |
| arylsulfatase | BACCOPRO_03339 | Not Available | Positive | 3302552 - 3304060 | 56340.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


