Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03320 | Not Available | Positive | 3282622 - 3284232 | 59213.1 |
| hypothetical protein | BACCOPRO_03321 | Not Available | Negative | 3284239 - 3284496 | 9977.12 |
| hypothetical protein | BACCOPRO_03323 | Not Available | Negative | 3284562 - 3284720 | 5987.47 |
| radical sam protein, tigr01212 family | BACCOPRO_03322 | Not Available | Positive | 3284707 - 3285654 | 36362.3 |
| metallo-beta-lactamase domain protein | BACCOPRO_03324 | Not Available | Positive | 3285688 - 3286878 | 45062.3 |
| hypothetical protein | BACCOPRO_03325 | Not Available | Negative | 3286976 - 3289816 | 107441.0 |
| transporter, small conductance mechanosensitive ion channel mscs family protein | BACCOPRO_03326 | Not Available | Negative | 3289922 - 3290779 | 31361.5 |
| sua5/ycio/yrdc/ywlc family protein | BACCOPRO_03327 | Not Available | Negative | 3290809 - 3291420 | 23177.9 |
| tetratricopeptide repeat protein | BACCOPRO_03328 | Not Available | Negative | 3291435 - 3293441 | 76030.9 |
| spfh/band 7/phb domain protein | BACCOPRO_03329 | Not Available | Positive | 3294105 - 3295046 | 34682.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


