Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin arginine-targeting protein translocase tatc | BACCOPRO_00320 | Not Available | Positive | 339748 - 340578 | 32008.9 |
| ribosomal protein s12 | BACCOPRO_00321 | Not Available | Positive | 340775 - 341179 | 14664.0 |
| ribosomal protein s7 | BACCOPRO_00322 | Not Available | Positive | 341339 - 341815 | 18148.0 |
| translation elongation factor g | BACCOPRO_00323 | Not Available | Positive | 341852 - 343969 | 77848.0 |
| ribosomal protein s10 | BACCOPRO_00324 | Not Available | Positive | 344064 - 344369 | 11405.0 |
| 50s ribosomal protein l3 | BACCOPRO_00325 | Not Available | Positive | 344390 - 345007 | 22006.9 |
| 50s ribosomal protein l4 | BACCOPRO_00326 | Not Available | Positive | 345007 - 345636 | 23028.9 |
| ribosomal protein l23 | BACCOPRO_00327 | Not Available | Positive | 345657 - 345947 | 10894.4 |
| ribosomal protein l2 | BACCOPRO_00328 | Not Available | Positive | 345955 - 346776 | 29645.0 |
| ribosomal protein s19 | BACCOPRO_00329 | Not Available | Positive | 346801 - 347070 | 9883.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


