Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding enzyme | BACCOPRO_03280 | Not Available | Negative | 3238380 - 3240035 | 62672.9 |
| cupin domain protein | BACCOPRO_03281 | Not Available | Negative | 3240050 - 3240308 | 9471.48 |
| dna-binding helix-turn-helix protein | BACCOPRO_03282 | Not Available | Negative | 3240309 - 3240633 | 12111.7 |
| methyltransferase domain protein | BACCOPRO_03283 | Not Available | Negative | 3240668 - 3241408 | 28100.5 |
| hypothetical protein | BACCOPRO_03284 | Not Available | Negative | 3241408 - 3241554 | 5860.02 |
| arginine repressor, c-terminal domain protein | BACCOPRO_03285 | Not Available | Positive | 3241572 - 3242051 | 17759.4 |
| hypothetical protein | BACCOPRO_03286 | Not Available | Positive | 3242080 - 3242649 | 21196.6 |
| putative argininosuccinate synthase | BACCOPRO_03287 | Not Available | Positive | 3242689 - 3243897 | 45043.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | BACCOPRO_03288 | Not Available | Positive | 3243894 - 3244862 | 36021.3 |
| aminotransferase, class iii | BACCOPRO_03289 | Not Available | Positive | 3244876 - 3245997 | 40534.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


