Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain protein | BACCOPRO_03270 | Not Available | Negative | 3228908 - 3230131 | 45553.5 |
| hypothetical protein | BACCOPRO_03271 | Not Available | Negative | 3230305 - 3230547 | 9538.62 |
| response regulator receiver domain protein | BACCOPRO_03272 | Not Available | Negative | 3230605 - 3231303 | 26031.3 |
| hypothetical protein | BACCOPRO_03273 | Not Available | Negative | 3231397 - 3232896 | 57384.8 |
| hypothetical protein | BACCOPRO_03274 | Not Available | Negative | 3232883 - 3233398 | 19574.3 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACCOPRO_03275 | Not Available | Negative | 3233417 - 3234739 | 50651.6 |
| hypothetical protein | BACCOPRO_03276 | Not Available | Positive | 3234914 - 3235516 | 22979.6 |
| hypothetical protein | BACCOPRO_03277 | Not Available | Positive | 3235683 - 3235943 | 9766.56 |
| hypothetical protein | BACCOPRO_03278 | Not Available | Negative | 3236233 - 3236465 | 9158.19 |
| oxidoreductase, nad-binding domain protein | BACCOPRO_03279 | Not Available | Positive | 3236644 - 3238191 | 57490.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


