Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03250 | Not Available | Positive | 3201145 - 3202101 | 36005.0 |
| hypothetical protein | BACCOPRO_03251 | Not Available | Negative | 3202091 - 3205513 | 129694.0 |
| hypothetical protein | BACCOPRO_03252 | Not Available | Negative | 3205678 - 3206961 | 50137.2 |
| hypothetical protein | BACCOPRO_03253 | Not Available | Negative | 3207102 - 3207728 | 23133.3 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACCOPRO_03254 | Not Available | Negative | 3207721 - 3209643 | 73711.2 |
| tonb-dependent receptor | BACCOPRO_03255 | Not Available | Negative | 3209948 - 3212422 | 93002.8 |
| transcriptional regulator, luxr family | BACCOPRO_03256 | Not Available | Negative | 3212633 - 3213217 | 21739.5 |
| chromate transport protein | BACCOPRO_03257 | Not Available | Negative | 3213229 - 3213792 | 20316.4 |
| chromate transport protein | BACCOPRO_03258 | Not Available | Negative | 3213789 - 3214358 | 21138.6 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACCOPRO_03259 | Not Available | Negative | 3214365 - 3218357 | 152872.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


