Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, family 11 | BACCOPRO_03220 | Not Available | Negative | 3164298 - 3165170 | 33851.4 |
| glycosyltransferase, family 8 | BACCOPRO_03221 | Not Available | Negative | 3165184 - 3166125 | 37398.1 |
| hypothetical protein | BACCOPRO_03222 | Not Available | Negative | 3166122 - 3167093 | 37761.3 |
| glycosyltransferase, group 2 family protein | BACCOPRO_03223 | Not Available | Negative | 3167093 - 3168097 | 39795.7 |
| glycosyltransferase, group 2 family protein | BACCOPRO_03224 | Not Available | Negative | 3168143 - 3169153 | 39752.1 |
| glycosyltransferase, group 1 family protein | BACCOPRO_03225 | Not Available | Negative | 3169174 - 3170313 | 43653.8 |
| hypothetical protein | BACCOPRO_03226 | Not Available | Negative | 3170383 - 3171480 | 42243.2 |
| 4fe-4s binding domain protein | BACCOPRO_03227 | Not Available | Negative | 3171480 - 3172550 | 41392.4 |
| polysaccharide biosynthesis protein | BACCOPRO_03228 | Not Available | Negative | 3172616 - 3174163 | 58350.1 |
| hypothetical protein | BACCOPRO_03229 | Not Available | Negative | 3174164 - 3174598 | 16898.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


