Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03210 | Not Available | Negative | 3154414 - 3155505 | 41313.9 |
| hypothetical protein | BACCOPRO_03211 | Not Available | Negative | 3155478 - 3155744 | 10230.3 |
| bacterial sugar transferase | BACCOPRO_03212 | Not Available | Negative | 3155787 - 3156458 | 25906.2 |
| glycosyltransferase, group 1 family protein | BACCOPRO_03213 | Not Available | Negative | 3156455 - 3157576 | 42097.6 |
| hypothetical protein | BACCOPRO_03214 | Not Available | Negative | 3157604 - 3158926 | 51313.1 |
| glycosyltransferase, group 1 family protein | BACCOPRO_03215 | Not Available | Negative | 3158930 - 3160180 | 48092.4 |
| glycosyltransferase, group 1 family protein | BACCOPRO_03216 | Not Available | Negative | 3160180 - 3161271 | 42445.5 |
| bacterial transferase hexapeptide repeat protein | BACCOPRO_03217 | Not Available | Negative | 3161353 - 3161961 | 22151.3 |
| hypothetical protein | BACCOPRO_03218 | Not Available | Negative | 3161954 - 3163267 | 50000.8 |
| glycosyltransferase, group 2 family protein | BACCOPRO_03219 | Not Available | Negative | 3163303 - 3164313 | 39934.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


