Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | BACCOPRO_03200 | Not Available | Negative | 3141964 - 3143628 | 62079.9 |
| peptidase s24-like protein | BACCOPRO_03201 | Not Available | Negative | 3143621 - 3144124 | 19545.2 |
| ompa family protein | BACCOPRO_03202 | Not Available | Negative | 3144194 - 3145390 | 44158.2 |
| hypothetical protein | BACCOPRO_03203 | Not Available | Negative | 3145425 - 3147425 | 72537.6 |
| hypothetical protein | BACCOPRO_03204 | Not Available | Negative | 3147409 - 3147600 | 7374.74 |
| hypothetical protein | BACCOPRO_03205 | Not Available | Negative | 3147597 - 3150041 | 90538.4 |
| hypothetical protein | BACCOPRO_03206 | Not Available | Negative | 3150032 - 3150205 | 6465.32 |
| chain length determinant protein | BACCOPRO_03207 | Not Available | Negative | 3150325 - 3152676 | 88958.2 |
| polysaccharide biosynthesis/export protein | BACCOPRO_03208 | Not Available | Negative | 3152700 - 3153491 | 29388.4 |
| hypothetical protein | BACCOPRO_03209 | Not Available | Negative | 3153501 - 3154397 | 33059.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


