Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03160 | Not Available | Negative | 3092420 - 3093613 | 46575.5 |
| hypothetical protein | BACCOPRO_03161 | Not Available | Negative | 3093618 - 3095930 | 88340.4 |
| hypothetical protein | BACCOPRO_03162 | Not Available | Negative | 3096254 - 3096670 | 15741.2 |
| hypothetical protein | BACCOPRO_03163 | Not Available | Negative | 3096809 - 3097208 | 15639.8 |
| hypothetical protein | BACCOPRO_03164 | Not Available | Negative | 3097226 - 3097618 | 15425.8 |
| hypothetical protein | BACCOPRO_03165 | Not Available | Negative | 3097623 - 3099566 | 74066.2 |
| hypothetical protein | BACCOPRO_03166 | Not Available | Positive | 3099670 - 3099810 | 5391.67 |
| 6-phosphofructokinase | BACCOPRO_03167 | Not Available | Negative | 3099831 - 3100832 | 36265.2 |
| hypothetical protein | BACCOPRO_03168 | Not Available | Negative | 3100909 - 3101037 | 5199.3 |
| arylsulfatase | BACCOPRO_03169 | Not Available | Negative | 3101353 - 3102915 | 58213.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


