Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03130 | Not Available | Positive | 3055889 - 3056536 | 24794.0 |
| glycosyl hydrolase family 16 | BACCOPRO_03131 | Not Available | Negative | 3056525 - 3057307 | 29574.1 |
| glutamate synthase (nadph), homotetrameric | BACCOPRO_03132 | Not Available | Positive | 3057563 - 3059857 | 82832.7 |
| hypothetical protein | BACCOPRO_03133 | Not Available | Positive | 3060053 - 3060517 | 16757.0 |
| transporter, major facilitator family protein | BACCOPRO_03134 | Not Available | Positive | 3060502 - 3061437 | 34407.5 |
| tetratricopeptide repeat protein | BACCOPRO_03135 | Not Available | Positive | 3061506 - 3064793 | 126615.0 |
| transcriptional regulator, arac family | BACCOPRO_03136 | Not Available | Negative | 3064905 - 3065792 | 34507.4 |
| hypothetical protein | BACCOPRO_03137 | Not Available | Positive | 3066132 - 3068330 | 82700.3 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACCOPRO_03138 | Not Available | Positive | 3068690 - 3071458 | 104243.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACCOPRO_03139 | Not Available | Positive | 3071460 - 3074234 | 103996.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


