Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03090 | Not Available | Negative | 3023602 - 3023778 | 6638.42 |
| hypothetical protein | BACCOPRO_03091 | Not Available | Negative | 3023968 - 3024246 | 10221.6 |
| cobq/cobb/mind/para nucleotide binding domain protein | BACCOPRO_03092 | Not Available | Negative | 3024254 - 3025009 | 27351.6 |
| single-strand binding family protein | BACCOPRO_03093 | Not Available | Negative | 3025129 - 3025554 | 15365.2 |
| dna binding domain, excisionase family | BACCOPRO_03094 | Not Available | Negative | 3025608 - 3025964 | 13843.8 |
| hypothetical protein | BACCOPRO_03095 | Not Available | Negative | 3026012 - 3026263 | 9417.13 |
| hypothetical protein | BACCOPRO_03096 | Not Available | Negative | 3026251 - 3026847 | 22289.2 |
| hypothetical protein | BACCOPRO_03097 | Not Available | Positive | 3026895 - 3027026 | 5182.34 |
| hypothetical protein | BACCOPRO_03098 | Not Available | Negative | 3027497 - 3027619 | 4360.56 |
| hypothetical protein | BACCOPRO_03099 | Not Available | Positive | 3027633 - 3027770 | 4932.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


