Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03080 | Not Available | Positive | 3020579 - 3020824 | 9236.79 |
| hypothetical protein | BACCOPRO_03081 | Not Available | Positive | 3020805 - 3021008 | 7942.43 |
| hypothetical protein | BACCOPRO_03082 | Not Available | Positive | 3021008 - 3021445 | 16808.2 |
| hypothetical protein | BACCOPRO_03083 | Not Available | Positive | 3021442 - 3021648 | 7853.83 |
| hypothetical protein | BACCOPRO_03084 | Not Available | Positive | 3021658 - 3021894 | 9128.25 |
| hypothetical protein | BACCOPRO_03085 | Not Available | Positive | 3021919 - 3022071 | 5352.58 |
| hypothetical protein | BACCOPRO_03086 | Not Available | Negative | 3022220 - 3022339 | 4520.6 |
| hypothetical protein | BACCOPRO_03087 | Not Available | Negative | 3022355 - 3022846 | 18619.4 |
| hypothetical protein | BACCOPRO_03088 | Not Available | Negative | 3022850 - 3023416 | 21789.9 |
| hypothetical protein | BACCOPRO_03089 | Not Available | Positive | 3023416 - 3023661 | 9019.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


