Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03070 | Not Available | Negative | 3013842 - 3014726 | 32435.0 |
| hypothetical protein | BACCOPRO_03071 | Not Available | Negative | 3014806 - 3015300 | 19597.9 |
| hypothetical protein | BACCOPRO_03072 | Not Available | Negative | 3015290 - 3015703 | 16037.5 |
| hypothetical protein | BACCOPRO_03073 | Not Available | Negative | 3015782 - 3016228 | 17331.1 |
| hypothetical protein | BACCOPRO_03074 | Not Available | Negative | 3016253 - 3017365 | 42488.5 |
| resolvase, n-terminal domain protein | BACCOPRO_03075 | Not Available | Positive | 3017620 - 3018243 | 23852.7 |
| hypothetical protein | BACCOPRO_03076 | Not Available | Positive | 3018260 - 3018874 | 24632.7 |
| hypothetical protein | BACCOPRO_03077 | Not Available | Positive | 3018948 - 3019484 | 21529.0 |
| thioredoxin | BACCOPRO_03078 | Not Available | Positive | 3019679 - 3019978 | 11409.1 |
| hypothetical protein | BACCOPRO_03079 | Not Available | Positive | 3019989 - 3020564 | 23087.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


