Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannosyl-glycoprotein endo-beta-n-acetylglucosaminidase | BACCOPRO_03060 | Not Available | Positive | 3003813 - 3005369 | 56491.4 |
| hypothetical protein | BACCOPRO_03061 | Not Available | Positive | 3005366 - 3005548 | 6798.65 |
| hypothetical protein | BACCOPRO_03062 | Not Available | Positive | 3005621 - 3006226 | 21968.3 |
| hypothetical protein | BACCOPRO_03063 | Not Available | Positive | 3006233 - 3008155 | 73390.2 |
| hypothetical protein | BACCOPRO_03064 | Not Available | Negative | 3008262 - 3008627 | 13636.2 |
| hypothetical protein | BACCOPRO_03065 | Not Available | Negative | 3008630 - 3008923 | 11390.4 |
| hypothetical protein | BACCOPRO_03067 | Not Available | Negative | 3009197 - 3009391 | 7855.96 |
| hypothetical protein | BACCOPRO_03066 | Not Available | Positive | 3009318 - 3010580 | 49351.8 |
| hypothetical protein | BACCOPRO_03068 | Not Available | Negative | 3010721 - 3012127 | 51905.7 |
| putative plasmid recombination enzyme | BACCOPRO_03069 | Not Available | Negative | 3012182 - 3013633 | 55107.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


