Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03010 | Not Available | Positive | 2965432 - 2965862 | 15887.5 |
| bro family, n-terminal domain protein | BACCOPRO_03011 | Not Available | Positive | 2965906 - 2966736 | 32091.6 |
| hypothetical protein | BACCOPRO_03012 | Not Available | Positive | 2966752 - 2967153 | 15808.5 |
| hypothetical protein | BACCOPRO_03013 | Not Available | Positive | 2967153 - 2968283 | 42051.2 |
| hypothetical protein | BACCOPRO_03014 | Not Available | Positive | 2968349 - 2968750 | 16687.8 |
| conjugative transposon trak protein | BACCOPRO_03015 | Not Available | Positive | 2968754 - 2969368 | 23705.9 |
| hypothetical protein | BACCOPRO_03016 | Not Available | Positive | 2969381 - 2969800 | 15874.1 |
| conjugative transposon tram protein | BACCOPRO_03017 | Not Available | Positive | 2969784 - 2970926 | 42105.6 |
| conjugative transposon tran protein | BACCOPRO_03018 | Not Available | Positive | 2970996 - 2971841 | 32137.5 |
| hypothetical protein | BACCOPRO_03019 | Not Available | Positive | 2971841 - 2972386 | 20839.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


