Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03000 | Not Available | Positive | 2955457 - 2956236 | 29260.8 |
| ser/thr phosphatase family protein | BACCOPRO_03001 | Not Available | Positive | 2956233 - 2957003 | 29662.8 |
| hypothetical protein | BACCOPRO_03002 | Not Available | Positive | 2957225 - 2957677 | 16888.6 |
| hypothetical protein | BACCOPRO_03003 | Not Available | Positive | 2957674 - 2958006 | 11838.8 |
| hypothetical protein | BACCOPRO_03004 | Not Available | Positive | 2958065 - 2958430 | 12814.1 |
| hypothetical protein | BACCOPRO_03005 | Not Available | Positive | 2958479 - 2958778 | 10850.6 |
| conjugation system atpase, trag family | BACCOPRO_03006 | Not Available | Positive | 2958901 - 2961606 | 103802.0 |
| hypothetical protein | BACCOPRO_03007 | Not Available | Positive | 2961857 - 2964367 | 94434.0 |
| hypothetical protein | BACCOPRO_03008 | Not Available | Positive | 2964382 - 2965107 | 28156.7 |
| hypothetical protein | BACCOPRO_03009 | Not Available | Positive | 2965135 - 2965431 | 11046.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


