Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00017 | Not Available | Negative | 22707 - 23471 | 29917.2 |
| hypothetical protein | BACCOPRO_00018 | Not Available | Negative | 23471 - 23941 | 18151.8 |
| dna-binding helix-turn-helix protein | BACCOPRO_00019 | Not Available | Negative | 23949 - 24155 | 7651.42 |
| hypothetical protein | BACCOPRO_00020 | Not Available | Negative | 24236 - 24424 | 7380.87 |
| hypothetical protein | BACCOPRO_00021 | Not Available | Positive | 24425 - 24642 | 8056.58 |
| hypothetical protein | BACCOPRO_00022 | Not Available | Negative | 24944 - 25192 | 9577.67 |
| hypothetical protein | BACCOPRO_00023 | Not Available | Positive | 25207 - 25521 | 12209.2 |
| hypothetical protein | BACCOPRO_00024 | Not Available | Positive | 25541 - 25891 | 13196.9 |
| hypothetical protein | BACCOPRO_00025 | Not Available | Positive | 25983 - 26360 | 13848.4 |
| hypothetical protein | BACCOPRO_00026 | Not Available | Positive | 26499 - 26840 | 12492.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


