Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02970 | Not Available | Positive | 2921870 - 2921989 | 4524.46 |
| hypothetical protein | BACCOPRO_02971 | Not Available | Positive | 2922606 - 2922800 | 7090.81 |
| acetyl-coa carboxylase, biotin carboxylase subunit | BACCOPRO_02972 | Not Available | Positive | 2923338 - 2924849 | 57119.7 |
| biotin-requiring enzyme | BACCOPRO_02973 | Not Available | Positive | 2924874 - 2925392 | 19001.8 |
| carboxyl transferase domain protein | BACCOPRO_02974 | Not Available | Positive | 2925395 - 2926927 | 55898.9 |
| redoxin family protein | BACCOPRO_02975 | Not Available | Positive | 2927049 - 2927603 | 20740.1 |
| putative n-acetylmuramoyl-l-alanine amidase | BACCOPRO_02976 | Not Available | Positive | 2927607 - 2928413 | 30649.1 |
| hypothetical protein | BACCOPRO_02977 | Not Available | Negative | 2928538 - 2929500 | 36627.2 |
| f5/8 type c domain protein | BACCOPRO_02979 | Not Available | Negative | 2929648 - 2931798 | 80808.9 |
| hypothetical protein | BACCOPRO_02978 | Not Available | Positive | 2931797 - 2931919 | 4590.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


