Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02930 | Not Available | Negative | 2886916 - 2888535 | 61516.9 |
| acyltransferase | BACCOPRO_02931 | Not Available | Negative | 2888660 - 2889214 | 21335.3 |
| hypothetical protein | BACCOPRO_02932 | Not Available | Negative | 2889211 - 2889492 | 10580.9 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | BACCOPRO_02933 | Not Available | Positive | 2889685 - 2891328 | 59983.1 |
| putative phage tail component domain protein | BACCOPRO_02934 | Not Available | Positive | 2891457 - 2892350 | 34930.9 |
| hypothetical protein | BACCOPRO_02935 | Not Available | Positive | 2892347 - 2892721 | 13168.1 |
| ribosomal protein l11 methyltransferase | BACCOPRO_02936 | Not Available | Negative | 2892847 - 2893692 | 31675.7 |
| hypothetical protein | BACCOPRO_02937 | Not Available | Negative | 2893835 - 2893975 | 5226.14 |
| hypothetical protein | BACCOPRO_02938 | Not Available | Positive | 2894029 - 2895306 | 48294.3 |
| hypothetical protein | BACCOPRO_02939 | Not Available | Positive | 2895307 - 2896971 | 61590.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


