Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 2853512 - 2853586 | Not Available |
| putative amidophosphoribosyltransferase | BACCOPRO_02901 | Not Available | Positive | 2853734 - 2855140 | 52223.0 |
| trcf domain protein | BACCOPRO_02902 | Not Available | Positive | 2855212 - 2857750 | 95937.4 |
| histidine acid phosphatase | BACCOPRO_02903 | Not Available | Positive | 2857892 - 2859178 | 49186.0 |
| hypothetical protein | BACCOPRO_02904 | Not Available | Positive | 2859215 - 2859388 | 6457.08 |
| tonb-dependent receptor | BACCOPRO_02905 | Not Available | Positive | 2859415 - 2862039 | 99076.5 |
| hypothetical protein | BACCOPRO_02906 | Not Available | Positive | 2862129 - 2863520 | 49725.7 |
| hypothetical protein | BACCOPRO_02907 | Not Available | Positive | 2863524 - 2863655 | 5220.59 |
| ser/thr phosphatase family protein | BACCOPRO_02908 | Not Available | Positive | 2863674 - 2864618 | 36136.4 |
| hypothetical protein | BACCOPRO_02909 | Not Available | Negative | 2864806 - 2866053 | 47607.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


