Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00281 | Not Available | Negative | 293408 - 293548 | 5242.18 |
| hypothetical protein | BACCOPRO_00280 | Not Available | Positive | 293526 - 293648 | 5037.12 |
| hypothetical protein | BACCOPRO_00282 | Not Available | Positive | 293652 - 294242 | 20827.4 |
| oxidoreductase, nad-binding domain protein | BACCOPRO_00283 | Not Available | Negative | 294294 - 295269 | 36522.8 |
| primosomal protein n' | BACCOPRO_00284 | Not Available | Positive | 295288 - 297825 | 96605.3 |
| php domain protein | BACCOPRO_00285 | Not Available | Positive | 297845 - 298564 | 26494.9 |
| low molecular weight phosphotyrosine protein phosphatase | BACCOPRO_00286 | Not Available | Positive | 298663 - 299073 | 15688.5 |
| anaerobic sulfatase maturase | BACCOPRO_00287 | Not Available | Positive | 299085 - 300311 | 47454.8 |
| 7tm receptor with intracellular hd hydrolase | BACCOPRO_00288 | Not Available | Negative | 300398 - 302461 | 78832.9 |
| glutamate--trna ligase | BACCOPRO_00289 | Not Available | Positive | 302528 - 304057 | 58518.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


