Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 2819107 - 2819183 | Not Available |
| hypothetical protein | BACCOPRO_02871 | Not Available | Positive | 2819257 - 2819778 | 19705.8 |
| pyridine nucleotide-disulfide oxidoreductase | BACCOPRO_02872 | Not Available | Positive | 2819903 - 2821945 | 73986.8 |
| hypothetical protein | BACCOPRO_02873 | Not Available | Positive | 2821946 - 2822353 | 15300.0 |
| transcriptional regulator, marr family | BACCOPRO_02874 | Not Available | Positive | 2822358 - 2822726 | 13496.7 |
| hypothetical protein | BACCOPRO_02875 | Not Available | Positive | 2822723 - 2823334 | 23658.3 |
| hypothetical protein | BACCOPRO_02876 | Not Available | Negative | 2823306 - 2824031 | 27885.6 |
| hypothetical protein | BACCOPRO_02877 | Not Available | Positive | 2824118 - 2824666 | 19751.9 |
| hypothetical protein | BACCOPRO_02878 | Not Available | Positive | 2824733 - 2825368 | 24110.2 |
| hypothetical protein | BACCOPRO_02879 | Not Available | Positive | 2825383 - 2826018 | 23512.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


