Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | BACCOPRO_02730 | Not Available | Positive | 2684029 - 2684796 | 28957.0 |
| ribosome biogenesis gtpase der | BACCOPRO_02731 | Not Available | Negative | 2685153 - 2686466 | 49332.4 |
| ribosome biogenesis gtpase era | BACCOPRO_02732 | Not Available | Negative | 2686507 - 2687388 | 33735.1 |
| beta-ketoacyl-acyl-carrier-protein synthase iii | BACCOPRO_02733 | Not Available | Negative | 2687469 - 2688329 | 31348.5 |
| putative 3-oxoacyl-(acyl carrier protein) synthase iii | BACCOPRO_02734 | Not Available | Negative | 2688330 - 2688496 | 6358.69 |
| ribosomal protein l32 | BACCOPRO_02735 | Not Available | Negative | 2688609 - 2688794 | 6852.33 |
| putative acr, cog1399 | BACCOPRO_02736 | Not Available | Negative | 2688811 - 2689374 | 21444.4 |
| n-acetylglucosamine-6-phosphate deacetylase | BACCOPRO_02737 | Not Available | Positive | 2689651 - 2690817 | 42562.5 |
| n-acetylglucosamine-6-phosphate deacetylase | BACCOPRO_02738 | Not Available | Positive | 2690838 - 2692007 | 42102.5 |
| hypothetical protein | BACCOPRO_02739 | Not Available | Positive | 2692192 - 2692687 | 18975.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


