Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | BACCOPRO_02670 | Not Available | Negative | 2609432 - 2611054 | 61160.8 |
| tonb-linked outer membrane protein, susc/raga family | BACCOPRO_02671 | Not Available | Negative | 2611075 - 2614413 | 123204.0 |
| glycosyl hydrolase family 20, catalytic domain protein | BACCOPRO_02672 | Not Available | Positive | 2614832 - 2616812 | 76644.4 |
| gdsl-like protein | BACCOPRO_02673 | Not Available | Positive | 2616809 - 2618890 | 78952.0 |
| hydrolyase, tartrate beta subunit/fumarate domain protein, fe-s type | BACCOPRO_02674 | Not Available | Negative | 2619286 - 2620929 | 60495.4 |
| redoxin family protein | BACCOPRO_02675 | Not Available | Negative | 2621020 - 2622567 | 58079.3 |
| gtp-binding protein hflx | BACCOPRO_02676 | Not Available | Negative | 2622598 - 2623854 | 47806.6 |
| hypothetical protein | BACCOPRO_02677 | Not Available | Negative | 2623956 - 2624144 | 7157.59 |
| hypothetical protein | BACCOPRO_02678 | Not Available | Negative | 2624141 - 2624275 | 4772.69 |
| susd family protein | BACCOPRO_02679 | Not Available | Negative | 2624350 - 2625876 | 55861.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


