Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02650 | Not Available | Negative | 2587924 - 2588046 | 4510.65 |
| dna polymerase iii, delta' subunit | BACCOPRO_02651 | Not Available | Negative | 2588083 - 2589210 | 43390.9 |
| methylenetetrahydrofolate reductase (nad(p)h) | BACCOPRO_02652 | Not Available | Negative | 2589251 - 2590204 | 35845.0 |
| hypothetical protein | BACCOPRO_02653 | Not Available | Negative | 2590216 - 2590446 | 8640.07 |
| putative alpha-1,2-mannosidase | BACCOPRO_02654 | Not Available | Negative | 2590465 - 2592657 | 81765.7 |
| putative mannose-6-phosphate isomerase, class i | BACCOPRO_02655 | Not Available | Negative | 2592670 - 2593671 | 37125.8 |
| hypothetical protein | BACCOPRO_02656 | Not Available | Negative | 2593879 - 2594445 | 20195.0 |
| hypothetical protein | BACCOPRO_02657 | Not Available | Negative | 2594446 - 2594871 | 14884.4 |
| tonb-dependent receptor | BACCOPRO_02658 | Not Available | Negative | 2594918 - 2597608 | 100340.0 |
| tetratricopeptide repeat protein | BACCOPRO_02659 | Not Available | Negative | 2597951 - 2599414 | 54667.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


