Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02620 | Not Available | Negative | 2558018 - 2558795 | 29951.1 |
| hypothetical protein | BACCOPRO_02621 | Not Available | Negative | 2558811 - 2559047 | 8999.18 |
| Trna-pro | Not Available | Not Available | Positive | 2559218 - 2559292 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2559303 - 2559376 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2559419 - 2559489 | Not Available |
| iojap-like protein | BACCOPRO_02625 | Not Available | Positive | 2559668 - 2560120 | 17305.2 |
| atp-dependent metallopeptidase hflb | BACCOPRO_02626 | Not Available | Positive | 2560133 - 2562178 | 75348.6 |
| phosphatidate cytidylyltransferase | BACCOPRO_02627 | Not Available | Positive | 2562181 - 2563020 | 30545.0 |
| lipid-a-disaccharide synthase | BACCOPRO_02628 | Not Available | Negative | 2563121 - 2564257 | 43333.9 |
| 5'/3'-nucleotidase sure | BACCOPRO_02629 | Not Available | Negative | 2564259 - 2565029 | 27956.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


