Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02530 | Not Available | Negative | 2457841 - 2458005 | 6545.01 |
| pap2 family protein | BACCOPRO_02531 | Not Available | Positive | 2458179 - 2459576 | 52642.5 |
| dna primase | BACCOPRO_02532 | Not Available | Positive | 2459628 - 2461835 | 83512.4 |
| gtp cyclohydrolase i | BACCOPRO_02533 | Not Available | Negative | 2461848 - 2462441 | 22668.8 |
| sporulation and cell division repeat protein | BACCOPRO_02534 | Not Available | Negative | 2462453 - 2462914 | 17283.9 |
| triose-phosphate isomerase | BACCOPRO_02535 | Not Available | Negative | 2463063 - 2463473 | 14422.2 |
| triose-phosphate isomerase | BACCOPRO_02536 | Not Available | Negative | 2463475 - 2463819 | 12360.8 |
| doxx family protein | BACCOPRO_02537 | Not Available | Negative | 2463863 - 2465182 | 49780.5 |
| hypothetical protein | BACCOPRO_02538 | Not Available | Negative | 2465172 - 2465714 | 20727.1 |
| peptidase, m23 family | BACCOPRO_02539 | Not Available | Negative | 2465890 - 2466816 | 34604.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


