Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase, small subunit | BACCOPRO_02510 | Not Available | Positive | 2433482 - 2434393 | 35786.0 |
| sulfate adenylyltransferase, large subunit | BACCOPRO_02511 | Not Available | Positive | 2434415 - 2435920 | 56392.8 |
| hypothetical protein | BACCOPRO_02512 | Not Available | Positive | 2435939 - 2437045 | 43721.5 |
| hypothetical protein | BACCOPRO_02513 | Not Available | Positive | 2437085 - 2437232 | 5893.37 |
| alpha-l-fucosidase | BACCOPRO_02514 | Not Available | Negative | 2437328 - 2438665 | 50580.0 |
| sodium bile acid symporter family protein | BACCOPRO_02515 | Not Available | Negative | 2438742 - 2439701 | 35522.8 |
| rok family protein | BACCOPRO_02516 | Not Available | Negative | 2439714 - 2440922 | 44478.9 |
| cyclically-permuted mutarotase family protein | BACCOPRO_02517 | Not Available | Positive | 2441149 - 2442243 | 39973.6 |
| dihydrodipicolinate synthetase family | BACCOPRO_02518 | Not Available | Positive | 2442335 - 2443252 | 34064.2 |
| n-acylglucosamine 2-epimerase | BACCOPRO_02519 | Not Available | Positive | 2443258 - 2444442 | 45683.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


