Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02480 | Not Available | Negative | 2403946 - 2405310 | 52855.7 |
| hypothetical protein | BACCOPRO_02481 | Not Available | Negative | 2405339 - 2406694 | 52578.5 |
| hypothetical protein | BACCOPRO_02482 | Not Available | Negative | 2406703 - 2406867 | 6095.18 |
| hydrolase, p-loop family | BACCOPRO_02483 | Not Available | Positive | 2406937 - 2407458 | 19648.4 |
| hypothetical protein | BACCOPRO_02484 | Not Available | Positive | 2407464 - 2407685 | 8387.44 |
| hypothetical protein | BACCOPRO_02485 | Not Available | Negative | 2407783 - 2408124 | 13155.9 |
| thioredoxin | BACCOPRO_02486 | Not Available | Negative | 2408147 - 2408464 | 11552.8 |
| dna polymerase iii, alpha subunit | BACCOPRO_02487 | Not Available | Negative | 2408513 - 2412310 | 143808.0 |
| phosphatidylserine decarboxylase | BACCOPRO_02488 | Not Available | Positive | 2412378 - 2413160 | 29671.5 |
| putative cdp-diacylglycerol-serine o-phosphatidyltransferase | BACCOPRO_02489 | Not Available | Positive | 2413259 - 2413894 | 23573.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


