Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lao/ao transport system atpase | BACCOPRO_02450 | Not Available | Negative | 2361775 - 2362884 | 41012.2 |
| hypothetical protein | BACCOPRO_02451 | Not Available | Negative | 2362888 - 2363964 | 39516.9 |
| alpha-2-macroglobulin family protein | BACCOPRO_02452 | Not Available | Negative | 2364029 - 2369662 | 212156.0 |
| hypothetical protein | BACCOPRO_02453 | Not Available | Negative | 2369768 - 2369932 | 6061.56 |
| xaa-his dipeptidase | BACCOPRO_02454 | Not Available | Negative | 2370131 - 2371588 | 53213.6 |
| hypothetical protein | BACCOPRO_02455 | Not Available | Negative | 2371607 - 2372611 | 37152.6 |
| dimethyladenosine transferase | BACCOPRO_02456 | Not Available | Positive | 2372708 - 2373505 | 30307.0 |
| magnesium transporter | BACCOPRO_02457 | Not Available | Positive | 2373549 - 2374889 | 49667.9 |
| hypothetical protein | BACCOPRO_02458 | Not Available | Positive | 2375133 - 2376938 | 69949.8 |
| alanine racemase | BACCOPRO_02459 | Not Available | Negative | 2377173 - 2379638 | 92412.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


