Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02430 | Not Available | Negative | 2345015 - 2345479 | 17904.9 |
| hypothetical protein | BACCOPRO_02431 | Not Available | Negative | 2345483 - 2346070 | 22323.5 |
| hypothetical protein | BACCOPRO_02432 | Not Available | Negative | 2346110 - 2346574 | 16477.7 |
| transporter, mota/tolq/exbb proton channel family protein | BACCOPRO_02433 | Not Available | Negative | 2346583 - 2347371 | 28045.9 |
| Trna-ser | Not Available | Not Available | Positive | 2347445 - 2347535 | Not Available |
| hydrolase, tatd family | BACCOPRO_02435 | Not Available | Negative | 2347693 - 2348481 | 29821.9 |
| polyprenyl synthetase | BACCOPRO_02436 | Not Available | Negative | 2348486 - 2349469 | 37340.1 |
| tonb-dependent receptor | BACCOPRO_02437 | Not Available | Negative | 2349654 - 2350343 | 25822.8 |
| hypothetical protein | BACCOPRO_02439 | Not Available | Negative | 2350361 - 2350498 | 5246.39 |
| cytidylate kinase | BACCOPRO_02438 | Not Available | Positive | 2350461 - 2351210 | 28364.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


