Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein cas2 | BACCOPRO_02410 | Not Available | Positive | 2329191 - 2329481 | 11047.3 |
| hypothetical protein | BACCOPRO_02411 | Not Available | Positive | 2330270 - 2330524 | 9098.98 |
| transposase, is605 orfb family | BACCOPRO_02412 | Not Available | Negative | 2330516 - 2331409 | 33214.4 |
| hypothetical protein | BACCOPRO_02413 | Not Available | Positive | 2331416 - 2331760 | 12441.6 |
| transposase-like protein | BACCOPRO_02414 | Not Available | Positive | 2331794 - 2332201 | 16286.9 |
| hypothetical protein | BACCOPRO_02415 | Not Available | Negative | 2332315 - 2332815 | 18389.5 |
| hypothetical protein | BACCOPRO_02416 | Not Available | Negative | 2333324 - 2333755 | 16604.8 |
| hypothetical protein | BACCOPRO_02417 | Not Available | Negative | 2333829 - 2333972 | 5933.62 |
| histidine--trna ligase | BACCOPRO_02418 | Not Available | Negative | 2334206 - 2335570 | 50402.8 |
| putative neutral zinc metallopeptidase | BACCOPRO_02419 | Not Available | Negative | 2335678 - 2336355 | 24631.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


