Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02370 | Not Available | Negative | 2281502 - 2281807 | 11339.9 |
| polyphosphate kinase 1 | BACCOPRO_02371 | Not Available | Negative | 2281941 - 2284034 | 81480.6 |
| phosphodiesterase family protein | BACCOPRO_02372 | Not Available | Positive | 2284098 - 2284589 | 18703.4 |
| dtdp-glucose 4,6-dehydratase | BACCOPRO_02373 | Not Available | Positive | 2284606 - 2285799 | 45684.2 |
| hypothetical protein | BACCOPRO_02375 | Not Available | Negative | 2285772 - 2285996 | 8875.91 |
| hypothetical protein | BACCOPRO_02374 | Not Available | Positive | 2285986 - 2286195 | 7893.52 |
| mboat family protein | BACCOPRO_02376 | Not Available | Negative | 2286199 - 2287704 | 58354.6 |
| gdsl-like protein | BACCOPRO_02377 | Not Available | Negative | 2287682 - 2288644 | 36070.8 |
| hypothetical protein | BACCOPRO_02378 | Not Available | Negative | 2288631 - 2290016 | 51161.4 |
| transcriptional regulator, tetr family | BACCOPRO_02379 | Not Available | Negative | 2290067 - 2290711 | 25558.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


