Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02350 | Not Available | Positive | 2266555 - 2266794 | 9207.05 |
| hypothetical protein | BACCOPRO_02351 | Not Available | Positive | 2267161 - 2267724 | 22493.4 |
| site-specific recombinase, phage integrase family | BACCOPRO_02352 | Not Available | Positive | 2267721 - 2268380 | 25499.4 |
| hypothetical protein | BACCOPRO_02353 | Not Available | Negative | 2268403 - 2268525 | 4361.39 |
| hypothetical protein | BACCOPRO_02354 | Not Available | Positive | 2268606 - 2269775 | 45435.7 |
| hypothetical protein | BACCOPRO_02355 | Not Available | Positive | 2269779 - 2270660 | 34447.0 |
| hypothetical protein | BACCOPRO_02356 | Not Available | Positive | 2270718 - 2271335 | 23863.1 |
| hypothetical protein | BACCOPRO_02357 | Not Available | Positive | 2271351 - 2271506 | 6181.55 |
| hypothetical protein | BACCOPRO_02358 | Not Available | Positive | 2271522 - 2271866 | 13250.9 |
| hypothetical protein | BACCOPRO_02359 | Not Available | Positive | 2271885 - 2272091 | 8316.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


