Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02340 | Not Available | Positive | 2256590 - 2256793 | 7259.65 |
| acyltransferase | BACCOPRO_02341 | Not Available | Positive | 2256871 - 2257935 | 41464.4 |
| acyltransferase | BACCOPRO_02342 | Not Available | Positive | 2257991 - 2259154 | 43474.2 |
| hypothetical protein | BACCOPRO_02343 | Not Available | Positive | 2259299 - 2259793 | 19059.6 |
| hypothetical protein | BACCOPRO_02344 | Not Available | Positive | 2259858 - 2260991 | 42656.5 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | BACCOPRO_02345 | Not Available | Negative | 2260988 - 2262286 | 47844.1 |
| dihydrolipoyl dehydrogenase | BACCOPRO_02346 | Not Available | Negative | 2262411 - 2263754 | 48448.9 |
| hypothetical protein | BACCOPRO_02347 | Not Available | Negative | 2263792 - 2264187 | 15648.4 |
| hypothetical protein | BACCOPRO_02348 | Not Available | Negative | 2264218 - 2264634 | 15882.9 |
| l-aspartate oxidase | BACCOPRO_02349 | Not Available | Positive | 2264711 - 2266294 | 59084.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


