Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02330 | Not Available | Positive | 2245467 - 2245631 | 6616.36 |
| hypothetical protein | BACCOPRO_02331 | Not Available | Positive | 2245897 - 2247639 | 62246.1 |
| hypothetical protein | BACCOPRO_02332 | Not Available | Positive | 2247749 - 2248495 | 26973.6 |
| abc transporter, substrate-binding protein | BACCOPRO_02333 | Not Available | Positive | 2248659 - 2249549 | 33506.0 |
| abc transporter, atp-binding protein | BACCOPRO_02334 | Not Available | Positive | 2249546 - 2250307 | 28138.3 |
| hypothetical protein | BACCOPRO_02335 | Not Available | Positive | 2250396 - 2253722 | 126809.0 |
| polysaccharide deacetylase | BACCOPRO_02336 | Not Available | Positive | 2253788 - 2254399 | 24536.9 |
| cyclic nucleotide-binding domain protein | BACCOPRO_02337 | Not Available | Positive | 2254471 - 2255052 | 22149.8 |
| hypothetical protein | BACCOPRO_02338 | Not Available | Positive | 2255124 - 2256263 | 43949.9 |
| hypothetical protein | BACCOPRO_02339 | Not Available | Negative | 2256253 - 2256387 | 5172.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


