Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad dependent epimerase/dehydratase family protein | BACCOPRO_02310 | Not Available | Negative | 2220828 - 2221910 | 41730.8 |
| ribonuclease r | BACCOPRO_02311 | Not Available | Positive | 2221968 - 2224229 | 86668.5 |
| hypothetical protein | BACCOPRO_02312 | Not Available | Negative | 2224317 - 2224448 | 4855.02 |
| putative serine o-acetyltransferase | BACCOPRO_02313 | Not Available | Positive | 2224512 - 2225411 | 32768.4 |
| arylsulfatase | BACCOPRO_02314 | Not Available | Negative | 2225517 - 2226995 | 54741.4 |
| hypothetical protein | BACCOPRO_02315 | Not Available | Negative | 2227295 - 2228389 | 41054.4 |
| type i phosphodiesterase / nucleotide pyrophosphatase | BACCOPRO_02316 | Not Available | Negative | 2228402 - 2229331 | 34024.8 |
| hypothetical protein | BACCOPRO_02317 | Not Available | Negative | 2229508 - 2230620 | 42803.6 |
| ser/thr phosphatase family protein | BACCOPRO_02318 | Not Available | Negative | 2230627 - 2231610 | 37450.5 |
| hypothetical protein | BACCOPRO_02319 | Not Available | Negative | 2231680 - 2232864 | 44856.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


