Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh3 auxin-responsive promoter | BACCOPRO_02269 | Not Available | Positive | 2179638 - 2181143 | 57194.3 |
| hypothetical protein | BACCOPRO_02271 | Not Available | Positive | 2181140 - 2182678 | 58667.4 |
| hypothetical protein | BACCOPRO_02272 | Not Available | Positive | 2182708 - 2183070 | 14333.9 |
| hypothetical protein | BACCOPRO_02273 | Not Available | Positive | 2183076 - 2183891 | 31318.0 |
| hypothetical protein | BACCOPRO_02274 | Not Available | Positive | 2183888 - 2184037 | 5862.14 |
| hypothetical protein | BACCOPRO_02275 | Not Available | Negative | 2184109 - 2184270 | 6049.93 |
| hypothetical protein | BACCOPRO_02276 | Not Available | Positive | 2184328 - 2186868 | 95124.6 |
| hypothetical protein | BACCOPRO_02277 | Not Available | Negative | 2187049 - 2189334 | 86219.2 |
| hypothetical protein | BACCOPRO_02278 | Not Available | Positive | 2189392 - 2189574 | 7122.5 |
| glycosyl hydrolase, family 43 | BACCOPRO_02279 | Not Available | Positive | 2189616 - 2190662 | 39656.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


