Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02240 | Not Available | Negative | 2140567 - 2141283 | 27279.6 |
| 4-phosphoerythronate dehydrogenase | BACCOPRO_02241 | Not Available | Positive | 2141400 - 2142410 | 37724.1 |
| alpha-l-fucosidase | BACCOPRO_02242 | Not Available | Positive | 2142464 - 2143864 | 54253.9 |
| glycosyl hydrolase family 3 n-terminal domain protein | BACCOPRO_02243 | Not Available | Positive | 2143861 - 2146224 | 85994.1 |
| hypothetical protein | BACCOPRO_02244 | Not Available | Negative | 2146397 - 2147338 | 36023.7 |
| hypothetical protein | BACCOPRO_02245 | Not Available | Positive | 2147395 - 2147592 | 7484.11 |
| hypothetical protein | BACCOPRO_02246 | Not Available | Negative | 2147574 - 2150612 | 115924.0 |
| glycosyl hydrolase family 35 | BACCOPRO_02247 | Not Available | Negative | 2150650 - 2153301 | 99772.4 |
| rna polymerase sigma-70 factor | BACCOPRO_02248 | Not Available | Positive | 2153562 - 2154116 | 21678.2 |
| hypothetical protein | BACCOPRO_02249 | Not Available | Positive | 2154217 - 2155140 | 34901.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


